Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Gm13015-201ENSMUST00000118674 204 ntBASIC18.5■□□□□ 0.55
Col5a2Q3U962 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.5■□□□□ 0.55
Col5a2Q3U962 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col5a2Q3U962 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Gm18737-201ENSMUST00000173594 937 ntBASIC18.49■□□□□ 0.55
Col5a2Q3U962 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.49■□□□□ 0.55
Col5a2Q3U962 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col5a2Q3U962 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Gm14127-201ENSMUST00000117906 678 ntBASIC18.48■□□□□ 0.55
Col5a2Q3U962 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Gm27989-201ENSMUST00000184721 107 ntBASIC18.48■□□□□ 0.55
Col5a2Q3U962 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col5a2Q3U962 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Gm15487-201ENSMUST00000122373 465 ntBASIC18.47■□□□□ 0.55
Col5a2Q3U962 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Gm9824-201ENSMUST00000178707 561 ntBASIC18.47■□□□□ 0.55
Col5a2Q3U962 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.47■□□□□ 0.55
Col5a2Q3U962 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col5a2Q3U962 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.47■□□□□ 0.55
Col5a2Q3U962 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.47■□□□□ 0.55
Col5a2Q3U962 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Gm9063-201ENSMUST00000223299 582 ntBASIC18.46■□□□□ 0.55
Col5a2Q3U962 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col5a2Q3U962 Gm12490-201ENSMUST00000120255 560 ntBASIC18.46■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms