Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim7Q3TJD7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Gm9385-201ENSMUST00000117563 472 ntBASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Gm11424-201ENSMUST00000121929 829 ntBASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Gm10253-201ENSMUST00000194270 940 ntBASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.56■□□□□ 0.4
Pdlim7Q3TJD7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim7Q3TJD7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gm6257-201ENSMUST00000163864 910 ntBASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gm27437-201ENSMUST00000183429 107 ntBASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gm27430-201ENSMUST00000184585 107 ntBASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gm44333-201ENSMUST00000197168 107 ntBASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim7Q3TJD7 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pdlim7Q3TJD7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pdlim7Q3TJD7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms