Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Lrfn1Q2WF71 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 App-207ENSMUST00000227737 2827 ntBASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.6□□□□□ -0.07
Lrfn1Q2WF71 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Gm43799-201ENSMUST00000201845 579 ntBASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Lrfn1Q2WF71 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lrfn1Q2WF71 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Gm38027-201ENSMUST00000192315 235 ntBASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lrfn1Q2WF71 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms