Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm16026-204ENSMUST00000162652 683 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm18054-201ENSMUST00000207539 555 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm12341-201ENSMUST00000119724 503 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm45930-201ENSMUST00000221330 292 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm37986-201ENSMUST00000193285 383 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm7561-201ENSMUST00000211203 886 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm6013-201ENSMUST00000212264 699 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Gm7993-201ENSMUST00000200970 1384 ntBASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC8.27□□□□□ -1.09
Ush2AQ2QI47 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm27514-201ENSMUST00000183692 110 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm27516-201ENSMUST00000184237 98 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 AC090659.2-201ENSMUST00000225378 1186 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 AC130669.1-201ENSMUST00000228537 1672 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm9823-201ENSMUST00000051212 327 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Trav4d-2-201ENSMUST00000120914 335 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm27501-201ENSMUST00000183599 107 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm9797-201ENSMUST00000052902 613 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm45667-201ENSMUST00000210380 1316 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm3961-201ENSMUST00000204425 994 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ush2AQ2QI47 AL645783.1-201ENSMUST00000221416 1832 ntBASIC8.26□□□□□ -1.09
Ush2AQ2QI47 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm12997-201ENSMUST00000120207 640 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 B9d1os-201ENSMUST00000137010 674 ntBASIC8.25□□□□□ -1.09
Ush2AQ2QI47 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms