Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col19a1Q0VF58 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Gm12138-201ENSMUST00000122180 951 ntBASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Gm23984-201ENSMUST00000157139 203 ntBASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
Col19a1Q0VF58 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col19a1Q0VF58 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Gm13015-201ENSMUST00000118674 204 ntBASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Gm28630-201ENSMUST00000187806 498 ntBASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Gm38225-201ENSMUST00000194001 393 ntBASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col19a1Q0VF58 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Gm6007-201ENSMUST00000208170 823 ntBASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Gm7775-201ENSMUST00000218871 853 ntBASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col19a1Q0VF58 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms