Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Tff1Q08423 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Tff1Q08423 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.09□□□□□ -0.31
Tff1Q08423 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tff1Q08423 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tff1Q08423 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tff1Q08423 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tff1Q08423 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tff1Q08423 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tff1Q08423 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tff1Q08423 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Tff1Q08423 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.08□□□□□ -0.31
Tff1Q08423 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Tff1Q08423 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Tff1Q08423 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Gm26039-201ENSMUST00000158152 144 ntBASIC13.08□□□□□ -0.32
Tff1Q08423 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Mir3081-201ENSMUST00000175305 84 ntBASIC13.08□□□□□ -0.32
Tff1Q08423 Mzt1-203ENSMUST00000227948 952 ntBASIC13.08□□□□□ -0.32
Tff1Q08423 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Tff1Q08423 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Tff1Q08423 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.08□□□□□ -0.32
Tff1Q08423 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Tff1Q08423 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Tff1Q08423 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Tff1Q08423 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Gm11355-201ENSMUST00000121120 306 ntBASIC13.07□□□□□ -0.32
Tff1Q08423 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Tff1Q08423 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Tff1Q08423 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tff1Q08423 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.07□□□□□ -0.32
Tff1Q08423 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Tff1Q08423 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.06□□□□□ -0.32
Tff1Q08423 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.06□□□□□ -0.32
Tff1Q08423 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Tff1Q08423 Gm11950-201ENSMUST00000121615 838 ntBASIC13.06□□□□□ -0.32
Tff1Q08423 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.06□□□□□ -0.32
Tff1Q08423 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.06□□□□□ -0.32
Tff1Q08423 Gm29707-201ENSMUST00000196325 491 ntBASIC13.06□□□□□ -0.32
Tff1Q08423 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tff1Q08423 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Tff1Q08423 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.06□□□□□ -0.32
Tff1Q08423 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tff1Q08423 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.06□□□□□ -0.32
Tff1Q08423 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms