Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.23■□□□□ 0.19
IhhP97812 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.23■□□□□ 0.19
IhhP97812 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Gm27300-201ENSMUST00000184085 97 ntBASIC16.23■□□□□ 0.19
IhhP97812 Gm27335-201ENSMUST00000184758 97 ntBASIC16.23■□□□□ 0.19
IhhP97812 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.23■□□□□ 0.19
IhhP97812 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
IhhP97812 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IhhP97812 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.23■□□□□ 0.19
IhhP97812 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IhhP97812 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Gm11779-201ENSMUST00000118541 368 ntBASIC16.22■□□□□ 0.19
IhhP97812 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.22■□□□□ 0.19
IhhP97812 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.22■□□□□ 0.19
IhhP97812 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.22■□□□□ 0.19
IhhP97812 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.22■□□□□ 0.19
IhhP97812 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IhhP97812 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.22■□□□□ 0.19
IhhP97812 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IhhP97812 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
IhhP97812 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
IhhP97812 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Gm14140-201ENSMUST00000119999 995 ntBASIC16.21■□□□□ 0.19
IhhP97812 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IhhP97812 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.21■□□□□ 0.19
IhhP97812 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Gm18489-201ENSMUST00000172565 551 ntBASIC16.21■□□□□ 0.19
IhhP97812 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
IhhP97812 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
IhhP97812 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
IhhP97812 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
IhhP97812 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
IhhP97812 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IhhP97812 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.2■□□□□ 0.18
IhhP97812 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
IhhP97812 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.2■□□□□ 0.18
IhhP97812 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IhhP97812 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IhhP97812 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IhhP97812 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms