Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcc1P97496 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc1P97496 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcc1P97496 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Smarcc1P97496 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Smarcc1P97496 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Gm7774-201ENSMUST00000200064 533 ntBASIC19.58■□□□□ 0.72
Smarcc1P97496 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.58■□□□□ 0.72
Smarcc1P97496 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Smarcc1P97496 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 CT025626.1-201ENSMUST00000223735 1455 ntBASIC19.58■□□□□ 0.72
Smarcc1P97496 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Smarcc1P97496 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC19.58■□□□□ 0.72
Smarcc1P97496 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcc1P97496 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Smarcc1P97496 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Gm12008-201ENSMUST00000117791 755 ntBASIC19.57■□□□□ 0.72
Smarcc1P97496 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.57■□□□□ 0.72
Smarcc1P97496 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.57■□□□□ 0.72
Smarcc1P97496 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.57■□□□□ 0.72
Smarcc1P97496 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.57■□□□□ 0.72
Smarcc1P97496 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcc1P97496 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.56■□□□□ 0.72
Smarcc1P97496 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcc1P97496 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcc1P97496 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcc1P97496 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.56■□□□□ 0.72
Smarcc1P97496 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.56■□□□□ 0.72
Smarcc1P97496 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smarcc1P97496 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smarcc1P97496 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smarcc1P97496 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcc1P97496 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smarcc1P97496 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcc1P97496 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.55■□□□□ 0.72
Smarcc1P97496 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.55■□□□□ 0.72
Smarcc1P97496 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcc1P97496 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.55■□□□□ 0.72
Smarcc1P97496 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Smarcc1P97496 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcc1P97496 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.54■□□□□ 0.72
Smarcc1P97496 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.54■□□□□ 0.72
Smarcc1P97496 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.54■□□□□ 0.72
Smarcc1P97496 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Smarcc1P97496 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcc1P97496 Gm27622-201ENSMUST00000183779 60 ntBASIC19.54■□□□□ 0.72
Smarcc1P97496 Gm27430-201ENSMUST00000184585 107 ntBASIC19.54■□□□□ 0.72
Smarcc1P97496 Gm44333-201ENSMUST00000197168 107 ntBASIC19.54■□□□□ 0.72
Smarcc1P97496 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms