Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Gm38027-201ENSMUST00000192315 235 ntBASIC13.2□□□□□ -0.3
SgcaP82350 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SgcaP82350 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.2□□□□□ -0.3
SgcaP82350 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.2□□□□□ -0.3
SgcaP82350 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcaP82350 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.19□□□□□ -0.3
SgcaP82350 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SgcaP82350 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
SgcaP82350 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SgcaP82350 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SgcaP82350 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.19□□□□□ -0.3
SgcaP82350 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SgcaP82350 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.19□□□□□ -0.3
SgcaP82350 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgcaP82350 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.18□□□□□ -0.3
SgcaP82350 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SgcaP82350 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SgcaP82350 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Gm12441-201ENSMUST00000121806 588 ntBASIC13.18□□□□□ -0.3
SgcaP82350 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.18□□□□□ -0.3
SgcaP82350 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.18□□□□□ -0.3
SgcaP82350 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.18□□□□□ -0.3
SgcaP82350 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.18□□□□□ -0.3
SgcaP82350 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgcaP82350 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SgcaP82350 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SgcaP82350 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.17□□□□□ -0.3
SgcaP82350 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SgcaP82350 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SgcaP82350 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SgcaP82350 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgcaP82350 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SgcaP82350 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SgcaP82350 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SgcaP82350 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms