Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf1P81269 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Atf1P81269 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.6□□□□□ -0.23
Atf1P81269 Gm6659-201ENSMUST00000174752 547 ntBASIC13.6□□□□□ -0.23
Atf1P81269 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf1P81269 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Atf1P81269 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.6□□□□□ -0.23
Atf1P81269 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Atf1P81269 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Atf1P81269 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Atf1P81269 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Atf1P81269 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.59□□□□□ -0.23
Atf1P81269 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Atf1P81269 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Atf1P81269 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Atf1P81269 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Atf1P81269 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Atf1P81269 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Atf1P81269 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Atf1P81269 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Atf1P81269 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.58□□□□□ -0.24
Atf1P81269 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.58□□□□□ -0.24
Atf1P81269 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.58□□□□□ -0.24
Atf1P81269 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Atf1P81269 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Atf1P81269 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atf1P81269 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Atf1P81269 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Atf1P81269 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms