Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.67■□□□□ 0.1
Ldb1P70662 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.67■□□□□ 0.1
Ldb1P70662 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ldb1P70662 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.66■□□□□ 0.1
Ldb1P70662 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ldb1P70662 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.66■□□□□ 0.1
Ldb1P70662 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Gm25406-201ENSMUST00000157599 105 ntBASIC15.66■□□□□ 0.1
Ldb1P70662 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ldb1P70662 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ldb1P70662 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ldb1P70662 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.66■□□□□ 0.1
Ldb1P70662 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.66■□□□□ 0.1
Ldb1P70662 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ldb1P70662 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm6257-201ENSMUST00000163864 910 ntBASIC15.65■□□□□ 0.1
Ldb1P70662 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Ldb1P70662 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Ldb1P70662 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.65■□□□□ 0.1
Ldb1P70662 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.65■□□□□ 0.1
Ldb1P70662 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.65■□□□□ 0.1
Ldb1P70662 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.65■□□□□ 0.1
Ldb1P70662 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.65■□□□□ 0.1
Ldb1P70662 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.65■□□□□ 0.1
Ldb1P70662 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.65■□□□□ 0.1
Ldb1P70662 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ldb1P70662 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ldb1P70662 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.64■□□□□ 0.09
Ldb1P70662 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Ldb1P70662 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Ldb1P70662 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Gm27357-201ENSMUST00000183754 135 ntBASIC15.64■□□□□ 0.09
Ldb1P70662 Gm17807-201ENSMUST00000186869 298 ntBASIC15.64■□□□□ 0.09
Ldb1P70662 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ldb1P70662 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ldb1P70662 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ldb1P70662 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ldb1P70662 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms