Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.08□□□□□ -0.32
Pdlim4P70271 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.08□□□□□ -0.32
Pdlim4P70271 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.08□□□□□ -0.32
Pdlim4P70271 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Pdlim4P70271 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
Pdlim4P70271 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pdlim4P70271 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pdlim4P70271 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.07□□□□□ -0.32
Pdlim4P70271 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim4P70271 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim4P70271 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pdlim4P70271 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Gm15372-201ENSMUST00000120729 834 ntBASIC13.07□□□□□ -0.32
Pdlim4P70271 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.07□□□□□ -0.32
Pdlim4P70271 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.07□□□□□ -0.32
Pdlim4P70271 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Pdlim4P70271 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pdlim4P70271 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.06□□□□□ -0.32
Pdlim4P70271 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.06□□□□□ -0.32
Pdlim4P70271 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.06□□□□□ -0.32
Pdlim4P70271 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pdlim4P70271 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pdlim4P70271 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pdlim4P70271 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pdlim4P70271 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Mir6404-201ENSMUST00000183699 94 ntBASIC13.05□□□□□ -0.32
Pdlim4P70271 Gm27867-201ENSMUST00000184778 125 ntBASIC13.05□□□□□ -0.32
Pdlim4P70271 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.05□□□□□ -0.32
Pdlim4P70271 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms