Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.31□□□□□ -0.92
Rps28P62858 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.31□□□□□ -0.92
Rps28P62858 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
Rps28P62858 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rps28P62858 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rps28P62858 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rps28P62858 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Rps28P62858 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.31□□□□□ -0.92
Rps28P62858 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 AC107452.1-201ENSMUST00000227963 481 ntBASIC9.31□□□□□ -0.92
Rps28P62858 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Rps28P62858 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.31□□□□□ -0.92
Rps28P62858 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Rps28P62858 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Gm38345-201ENSMUST00000192635 1748 ntBASIC9.31□□□□□ -0.92
Rps28P62858 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Rps28P62858 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Rps28P62858 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.3□□□□□ -0.92
Rps28P62858 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Rps28P62858 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.3□□□□□ -0.92
Rps28P62858 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Rps28P62858 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.3□□□□□ -0.92
Rps28P62858 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Rps28P62858 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms