Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gm7284-201ENSMUST00000131667 944 ntBASIC13.87□□□□□ -0.19
Sec61a1P61620 Gm17808-201ENSMUST00000200859 894 ntBASIC13.87□□□□□ -0.19
Sec61a1P61620 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.87□□□□□ -0.19
Sec61a1P61620 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Gm14859-201ENSMUST00000117752 357 ntBASIC13.86□□□□□ -0.19
Sec61a1P61620 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.86□□□□□ -0.19
Sec61a1P61620 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.86□□□□□ -0.19
Sec61a1P61620 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sec61a1P61620 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sec61a1P61620 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sec61a1P61620 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.85□□□□□ -0.19
Sec61a1P61620 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sec61a1P61620 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.84□□□□□ -0.19
Sec61a1P61620 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sec61a1P61620 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Phf7-203ENSMUST00000226565 1971 ntBASIC13.84□□□□□ -0.19
Sec61a1P61620 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Mir770-201ENSMUST00000103252 94 ntBASIC13.84□□□□□ -0.19
Sec61a1P61620 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sec61a1P61620 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms