Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cks1bP61025 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.23□□□□□ -0.61
Cks1bP61025 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cks1bP61025 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.23□□□□□ -0.61
Cks1bP61025 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cks1bP61025 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cks1bP61025 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.23□□□□□ -0.61
Cks1bP61025 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Gm10517-202ENSMUST00000192970 758 ntBASIC11.22□□□□□ -0.61
Cks1bP61025 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.22□□□□□ -0.61
Cks1bP61025 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cks1bP61025 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Gm10602-201ENSMUST00000098239 609 ntBASIC11.22□□□□□ -0.61
Cks1bP61025 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Cks1bP61025 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cks1bP61025 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cks1bP61025 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cks1bP61025 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.21□□□□□ -0.61
Cks1bP61025 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Cks1bP61025 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cks1bP61025 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.21□□□□□ -0.61
Cks1bP61025 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cks1bP61025 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.21□□□□□ -0.61
Cks1bP61025 Gm11249-201ENSMUST00000117071 859 ntBASIC11.21□□□□□ -0.61
Cks1bP61025 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.21□□□□□ -0.61
Cks1bP61025 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.21□□□□□ -0.61
Cks1bP61025 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cks1bP61025 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cks1bP61025 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.21□□□□□ -0.62
Cks1bP61025 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.21□□□□□ -0.62
Cks1bP61025 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Cks1bP61025 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.21□□□□□ -0.62
Cks1bP61025 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.21□□□□□ -0.62
Cks1bP61025 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.21□□□□□ -0.62
Cks1bP61025 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Cks1bP61025 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cks1bP61025 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.21□□□□□ -0.62
Cks1bP61025 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms