Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Sf3b6P59708 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Gm13836-201ENSMUST00000121159 501 ntBASIC13.98□□□□□ -0.17
Sf3b6P59708 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sf3b6P59708 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Sf3b6P59708 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sf3b6P59708 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3b6P59708 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.97□□□□□ -0.17
Sf3b6P59708 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Gm9987-201ENSMUST00000069768 567 ntBASIC13.97□□□□□ -0.17
Sf3b6P59708 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.97□□□□□ -0.17
Sf3b6P59708 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.97□□□□□ -0.17
Sf3b6P59708 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sf3b6P59708 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3b6P59708 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.96□□□□□ -0.17
Sf3b6P59708 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sf3b6P59708 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sf3b6P59708 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sf3b6P59708 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b6P59708 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sf3b6P59708 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b6P59708 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sf3b6P59708 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b6P59708 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.95□□□□□ -0.18
Sf3b6P59708 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms