Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.73□□□□□ -0.37
Sssca1P56873 Gm26039-201ENSMUST00000158152 144 ntBASIC12.73□□□□□ -0.37
Sssca1P56873 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.73□□□□□ -0.37
Sssca1P56873 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sssca1P56873 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.73□□□□□ -0.37
Sssca1P56873 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sssca1P56873 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sssca1P56873 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sssca1P56873 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.73□□□□□ -0.37
Sssca1P56873 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sssca1P56873 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.73□□□□□ -0.37
Sssca1P56873 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sssca1P56873 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sssca1P56873 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Sssca1P56873 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.72□□□□□ -0.37
Sssca1P56873 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.72□□□□□ -0.37
Sssca1P56873 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sssca1P56873 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.72□□□□□ -0.37
Sssca1P56873 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sssca1P56873 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sssca1P56873 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Sssca1P56873 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.71□□□□□ -0.37
Sssca1P56873 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.71□□□□□ -0.37
Sssca1P56873 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Mir1668-201ENSMUST00000184114 107 ntBASIC12.71□□□□□ -0.37
Sssca1P56873 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.71□□□□□ -0.37
Sssca1P56873 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sssca1P56873 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sssca1P56873 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sssca1P56873 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sssca1P56873 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sssca1P56873 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sssca1P56873 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sssca1P56873 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms