Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm13884-201ENSMUST00000118103 829 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 Gm8344-201ENSMUST00000119813 856 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 Gm11452-201ENSMUST00000122376 690 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.06□□□□□ -0.16
Cldn18P56857 Mir8098-201ENSMUST00000184011 137 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 Gm5864-201ENSMUST00000202263 970 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Gm6376-201ENSMUST00000209407 580 ntBASIC14.06□□□□□ -0.16
Cldn18P56857 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cldn18P56857 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cldn18P56857 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cldn18P56857 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn18P56857 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Cldn18P56857 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.05□□□□□ -0.16
Cldn18P56857 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.05□□□□□ -0.16
Cldn18P56857 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn18P56857 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Cldn18P56857 Gm28659-201ENSMUST00000188013 759 ntBASIC14.05□□□□□ -0.16
Cldn18P56857 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cldn18P56857 Gm19164-201ENSMUST00000210667 640 ntBASIC14.05□□□□□ -0.16
Cldn18P56857 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.05□□□□□ -0.16
Cldn18P56857 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn18P56857 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cldn18P56857 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cldn18P56857 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn18P56857 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn18P56857 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cldn18P56857 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Gm25990-201ENSMUST00000102440 86 ntBASIC14.04□□□□□ -0.16
Cldn18P56857 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn18P56857 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.04□□□□□ -0.16
Cldn18P56857 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.04□□□□□ -0.16
Cldn18P56857 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cldn18P56857 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.04□□□□□ -0.16
Cldn18P56857 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cldn18P56857 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn18P56857 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn18P56857 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn18P56857 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Gm27646-201ENSMUST00000183989 110 ntBASIC14.03□□□□□ -0.16
Cldn18P56857 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn18P56857 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldn18P56857 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn18P56857 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn18P56857 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.03□□□□□ -0.16
Cldn18P56857 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.03□□□□□ -0.16
Cldn18P56857 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn18P56857 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms