Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.46■□□□□ 0.23
NcanP55066 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.46■□□□□ 0.23
NcanP55066 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Gm2810-201ENSMUST00000118681 990 ntBASIC16.46■□□□□ 0.23
NcanP55066 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.46■□□□□ 0.23
NcanP55066 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.46■□□□□ 0.23
NcanP55066 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.46■□□□□ 0.23
NcanP55066 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NcanP55066 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NcanP55066 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NcanP55066 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NcanP55066 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NcanP55066 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
NcanP55066 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.45■□□□□ 0.22
NcanP55066 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.45■□□□□ 0.22
NcanP55066 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.45■□□□□ 0.22
NcanP55066 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NcanP55066 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NcanP55066 Gm9824-201ENSMUST00000178707 561 ntBASIC16.45■□□□□ 0.22
NcanP55066 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NcanP55066 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NcanP55066 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.45■□□□□ 0.22
NcanP55066 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.45■□□□□ 0.22
NcanP55066 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NcanP55066 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NcanP55066 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NcanP55066 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
NcanP55066 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NcanP55066 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NcanP55066 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NcanP55066 Gm13015-201ENSMUST00000118674 204 ntBASIC16.44■□□□□ 0.22
NcanP55066 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NcanP55066 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
NcanP55066 AY702102-202ENSMUST00000194651 1173 ntBASIC16.44■□□□□ 0.22
NcanP55066 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.44■□□□□ 0.22
NcanP55066 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.44■□□□□ 0.22
NcanP55066 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NcanP55066 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NcanP55066 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.43■□□□□ 0.22
NcanP55066 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.43■□□□□ 0.22
NcanP55066 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.43■□□□□ 0.22
NcanP55066 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.43■□□□□ 0.22
NcanP55066 Gm28630-201ENSMUST00000187806 498 ntBASIC16.43■□□□□ 0.22
NcanP55066 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
NcanP55066 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NcanP55066 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NcanP55066 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.43■□□□□ 0.22
NcanP55066 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.43■□□□□ 0.22
NcanP55066 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NcanP55066 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NcanP55066 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NcanP55066 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms