Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Gm21814-202ENSMUST00000203277 873 ntBASIC13.05□□□□□ -0.32
Nkx2-1P50220 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx2-1P50220 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Gm3375-201ENSMUST00000203929 796 ntBASIC13.04□□□□□ -0.32
Nkx2-1P50220 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 BC037039-201ENSMUST00000192003 2205 ntBASIC13.04□□□□□ -0.32
Nkx2-1P50220 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx2-1P50220 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.03□□□□□ -0.32
Nkx2-1P50220 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Mir5122-201ENSMUST00000175004 89 ntBASIC13.03□□□□□ -0.32
Nkx2-1P50220 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Gm44450-201ENSMUST00000199528 114 ntBASIC13.03□□□□□ -0.32
Nkx2-1P50220 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.03□□□□□ -0.32
Nkx2-1P50220 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.03□□□□□ -0.32
Nkx2-1P50220 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nkx2-1P50220 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms