Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atoh1P48985 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Atoh1P48985 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atoh1P48985 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atoh1P48985 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atoh1P48985 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Atoh1P48985 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.7■□□□□ 0.42
Atoh1P48985 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.7■□□□□ 0.42
Atoh1P48985 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.7■□□□□ 0.42
Atoh1P48985 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.7■□□□□ 0.42
Atoh1P48985 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.7■□□□□ 0.42
Atoh1P48985 Gm10154-201ENSMUST00000084445 354 ntBASIC17.7■□□□□ 0.42
Atoh1P48985 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atoh1P48985 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.7■□□□□ 0.42
Atoh1P48985 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atoh1P48985 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Atoh1P48985 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
Atoh1P48985 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Atoh1P48985 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Atoh1P48985 Haglr-201ENSMUST00000100000 2085 ntBASIC17.69■□□□□ 0.42
Atoh1P48985 Gm12151-201ENSMUST00000121374 290 ntBASIC17.69■□□□□ 0.42
Atoh1P48985 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Atoh1P48985 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.69■□□□□ 0.42
Atoh1P48985 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atoh1P48985 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.68■□□□□ 0.42
Atoh1P48985 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atoh1P48985 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.68■□□□□ 0.42
Atoh1P48985 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Atoh1P48985 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.68■□□□□ 0.42
Atoh1P48985 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.68■□□□□ 0.42
Atoh1P48985 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Atoh1P48985 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Atoh1P48985 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.68■□□□□ 0.42
Atoh1P48985 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atoh1P48985 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atoh1P48985 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Atoh1P48985 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.67■□□□□ 0.42
Atoh1P48985 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.67■□□□□ 0.42
Atoh1P48985 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.67■□□□□ 0.42
Atoh1P48985 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.67■□□□□ 0.42
Atoh1P48985 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Atoh1P48985 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atoh1P48985 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms