Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox2P48432 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox2P48432 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox2P48432 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.77□□□□□ -0.05
Sox2P48432 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox2P48432 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox2P48432 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.76□□□□□ -0.05
Sox2P48432 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.76□□□□□ -0.05
Sox2P48432 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Gm13474-201ENSMUST00000122466 815 ntBASIC14.76□□□□□ -0.05
Sox2P48432 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.76□□□□□ -0.05
Sox2P48432 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.76□□□□□ -0.05
Sox2P48432 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.76□□□□□ -0.05
Sox2P48432 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Sox2P48432 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sox2P48432 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.76□□□□□ -0.05
Sox2P48432 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox2P48432 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox2P48432 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox2P48432 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox2P48432 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Gm2274-201ENSMUST00000184539 609 ntBASIC14.75□□□□□ -0.05
Sox2P48432 Gm29257-201ENSMUST00000186115 639 ntBASIC14.75□□□□□ -0.05
Sox2P48432 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox2P48432 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox2P48432 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox2P48432 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Gm8520-201ENSMUST00000186517 868 ntBASIC14.74□□□□□ -0.05
Sox2P48432 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sox2P48432 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.74□□□□□ -0.05
Sox2P48432 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Gm5417-201ENSMUST00000079706 384 ntBASIC14.74□□□□□ -0.05
Sox2P48432 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.74□□□□□ -0.05
Sox2P48432 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox2P48432 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox2P48432 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox2P48432 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox2P48432 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox2P48432 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox2P48432 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms