Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vps4bP46467 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vps4bP46467 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vps4bP46467 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.95■□□□□ 0.14
Vps4bP46467 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Gm45328-201ENSMUST00000210942 917 ntBASIC15.95■□□□□ 0.14
Vps4bP46467 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Vps4bP46467 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.95■□□□□ 0.14
Vps4bP46467 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps4bP46467 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps4bP46467 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps4bP46467 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.94■□□□□ 0.14
Vps4bP46467 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.94■□□□□ 0.14
Vps4bP46467 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vps4bP46467 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Vps4bP46467 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.94■□□□□ 0.14
Vps4bP46467 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vps4bP46467 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vps4bP46467 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vps4bP46467 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.93■□□□□ 0.14
Vps4bP46467 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.93■□□□□ 0.14
Vps4bP46467 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.93■□□□□ 0.14
Vps4bP46467 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.93■□□□□ 0.14
Vps4bP46467 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Vps4bP46467 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vps4bP46467 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Vps4bP46467 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps4bP46467 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Vps4bP46467 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps4bP46467 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.92■□□□□ 0.14
Vps4bP46467 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps4bP46467 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Gm11950-201ENSMUST00000121615 838 ntBASIC15.92■□□□□ 0.14
Vps4bP46467 Gm7284-201ENSMUST00000131667 944 ntBASIC15.92■□□□□ 0.14
Vps4bP46467 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps4bP46467 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps4bP46467 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps4bP46467 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms