Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.01□□□□□ -0.01
Sox18P43680 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.01□□□□□ -0.01
Sox18P43680 Gm11745-201ENSMUST00000121669 448 ntBASIC15.01□□□□□ -0.01
Sox18P43680 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Sox18P43680 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
Sox18P43680 Gm22175-201ENSMUST00000175007 78 ntBASIC15.01□□□□□ -0.01
Sox18P43680 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Gm7787-201ENSMUST00000216858 688 ntBASIC15.01□□□□□ -0.01
Sox18P43680 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sox18P43680 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sox18P43680 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sox18P43680 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Sox18P43680 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sox18P43680 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sox18P43680 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15□□□□□ -0.01
Sox18P43680 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15□□□□□ -0.01
Sox18P43680 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Sox18P43680 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Gm6858-201ENSMUST00000208582 1468 ntBASIC15□□□□□ -0.01
Sox18P43680 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox18P43680 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sox18P43680 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox18P43680 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox18P43680 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox18P43680 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox18P43680 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.99□□□□□ -0.01
Sox18P43680 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Gm27437-201ENSMUST00000183429 107 ntBASIC14.99□□□□□ -0.01
Sox18P43680 Gm27622-201ENSMUST00000183779 60 ntBASIC14.99□□□□□ -0.01
Sox18P43680 Gm27301-201ENSMUST00000184012 127 ntBASIC14.99□□□□□ -0.01
Sox18P43680 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox18P43680 Gm45747-201ENSMUST00000212203 999 ntBASIC14.99□□□□□ -0.01
Sox18P43680 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.99□□□□□ -0.01
Sox18P43680 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox18P43680 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Sox18P43680 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox18P43680 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox18P43680 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox18P43680 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sox18P43680 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox18P43680 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox18P43680 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sox18P43680 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms