Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Abca1P41233 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.05□□□□□ -0.32
Abca1P41233 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Abca1P41233 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Abca1P41233 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.05□□□□□ -0.32
Abca1P41233 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.05□□□□□ -0.32
Abca1P41233 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Abca1P41233 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.05□□□□□ -0.32
Abca1P41233 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Abca1P41233 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Abca1P41233 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.04□□□□□ -0.32
Abca1P41233 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.04□□□□□ -0.32
Abca1P41233 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.04□□□□□ -0.32
Abca1P41233 Gm25406-201ENSMUST00000157599 105 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Abca1P41233 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Abca1P41233 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.04□□□□□ -0.32
Abca1P41233 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Abca1P41233 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Abca1P41233 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Abca1P41233 Gm14701-201ENSMUST00000117156 348 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Gm26308-201ENSMUST00000157768 69 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Gm5682-201ENSMUST00000173402 505 ntBASIC13.04□□□□□ -0.32
Abca1P41233 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Abca1P41233 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Abca1P41233 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.03□□□□□ -0.32
Abca1P41233 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.03□□□□□ -0.32
Abca1P41233 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Abca1P41233 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.03□□□□□ -0.32
Abca1P41233 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Abca1P41233 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Abca1P41233 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms