Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Timp3P39876 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Timp3P39876 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Timp3P39876 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Timp3P39876 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Timp3P39876 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Timp3P39876 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.87□□□□□ -0.35
Timp3P39876 Gm6296-201ENSMUST00000222599 943 ntBASIC12.87□□□□□ -0.35
Timp3P39876 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Timp3P39876 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.87□□□□□ -0.35
Timp3P39876 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.87□□□□□ -0.35
Timp3P39876 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Timp3P39876 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Timp3P39876 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.87□□□□□ -0.35
Timp3P39876 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.86□□□□□ -0.35
Timp3P39876 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.86□□□□□ -0.35
Timp3P39876 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Timp3P39876 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.86□□□□□ -0.35
Timp3P39876 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Gm25745-201ENSMUST00000174945 133 ntBASIC12.86□□□□□ -0.35
Timp3P39876 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.86□□□□□ -0.35
Timp3P39876 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.86□□□□□ -0.35
Timp3P39876 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.86□□□□□ -0.35
Timp3P39876 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.86□□□□□ -0.35
Timp3P39876 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Timp3P39876 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Timp3P39876 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Timp3P39876 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Timp3P39876 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.85□□□□□ -0.35
Timp3P39876 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Timp3P39876 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.85□□□□□ -0.35
Timp3P39876 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.85□□□□□ -0.35
Timp3P39876 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.85□□□□□ -0.35
Timp3P39876 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Timp3P39876 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Timp3P39876 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.85□□□□□ -0.35
Timp3P39876 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Timp3P39876 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Timp3P39876 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Timp3P39876 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms