Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.03■□□□□ -0
Cdh4P39038 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cdh4P39038 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh4P39038 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdh4P39038 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh4P39038 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh4P39038 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh4P39038 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.02■□□□□ -0
Cdh4P39038 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdh4P39038 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh4P39038 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Cdh4P39038 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.02■□□□□ -0
Cdh4P39038 Mir8098-201ENSMUST00000184011 137 ntBASIC15.02■□□□□ -0
Cdh4P39038 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh4P39038 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh4P39038 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdh4P39038 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Cdh4P39038 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdh4P39038 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh4P39038 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.01□□□□□ -0.01
Cdh4P39038 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Cdh4P39038 Gm5864-201ENSMUST00000202263 970 ntBASIC15.01□□□□□ -0.01
Cdh4P39038 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdh4P39038 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdh4P39038 Rps4l-201ENSMUST00000071745 943 ntBASIC15.01□□□□□ -0.01
Cdh4P39038 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdh4P39038 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdh4P39038 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Cdh4P39038 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh4P39038 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Gm8097-201ENSMUST00000117903 829 ntBASIC15□□□□□ -0.01
Cdh4P39038 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Gm9867-201ENSMUST00000192212 2647 ntBASIC15□□□□□ -0.01
Cdh4P39038 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh4P39038 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Gm8784-201ENSMUST00000222096 1435 ntBASIC15□□□□□ -0.01
Cdh4P39038 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15□□□□□ -0.01
Cdh4P39038 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15□□□□□ -0.01
Cdh4P39038 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdh4P39038 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdh4P39038 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.99□□□□□ -0.01
Cdh4P39038 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cdh4P39038 Gm44357-201ENSMUST00000195897 142 ntBASIC14.99□□□□□ -0.01
Cdh4P39038 Gm19658-201ENSMUST00000196231 138 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms