Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm27463-201ENSMUST00000183569 57 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm3375-201ENSMUST00000203929 796 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm4974-201ENSMUST00000209974 875 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.55□□□□□ -0.24
Slc6a1P31648 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Slc6a1P31648 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.55□□□□□ -0.24
Slc6a1P31648 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Slc6a1P31648 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.55□□□□□ -0.24
Slc6a1P31648 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Slc6a1P31648 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.54□□□□□ -0.24
Slc6a1P31648 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Slc6a1P31648 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Slc6a1P31648 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Slc6a1P31648 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.54□□□□□ -0.24
Slc6a1P31648 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Slc6a1P31648 Gm43799-201ENSMUST00000201845 579 ntBASIC13.54□□□□□ -0.24
Slc6a1P31648 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Slc6a1P31648 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.54□□□□□ -0.24
Slc6a1P31648 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Slc6a1P31648 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Slc6a1P31648 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Slc6a1P31648 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Slc6a1P31648 Gm12134-201ENSMUST00000122109 520 ntBASIC13.53□□□□□ -0.24
Slc6a1P31648 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Gm24841-201ENSMUST00000158676 357 ntBASIC13.53□□□□□ -0.24
Slc6a1P31648 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.53□□□□□ -0.24
Slc6a1P31648 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.53□□□□□ -0.24
Slc6a1P31648 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Slc6a1P31648 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Slc6a1P31648 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.53□□□□□ -0.24
Slc6a1P31648 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Slc6a1P31648 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Slc6a1P31648 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Slc6a1P31648 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms