Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.67■□□□□ 0.1
PdgfbP31240 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
PdgfbP31240 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.67■□□□□ 0.1
PdgfbP31240 Gm27989-201ENSMUST00000184721 107 ntBASIC15.67■□□□□ 0.1
PdgfbP31240 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.67■□□□□ 0.1
PdgfbP31240 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PdgfbP31240 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PdgfbP31240 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.67■□□□□ 0.1
PdgfbP31240 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PdgfbP31240 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PdgfbP31240 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.66■□□□□ 0.1
PdgfbP31240 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PdgfbP31240 Gm17837-201ENSMUST00000186435 985 ntBASIC15.66■□□□□ 0.1
PdgfbP31240 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.66■□□□□ 0.1
PdgfbP31240 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PdgfbP31240 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PdgfbP31240 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PdgfbP31240 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.65■□□□□ 0.1
PdgfbP31240 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PdgfbP31240 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
PdgfbP31240 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Gm14127-201ENSMUST00000117906 678 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 Gm15693-201ENSMUST00000120470 637 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PdgfbP31240 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.65■□□□□ 0.1
PdgfbP31240 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PdgfbP31240 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.65■□□□□ 0.1
PdgfbP31240 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 Gm10154-201ENSMUST00000084445 354 ntBASIC15.65■□□□□ 0.1
PdgfbP31240 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.65■□□□□ 0.1
PdgfbP31240 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.65■□□□□ 0.1
PdgfbP31240 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.65■□□□□ 0.1
PdgfbP31240 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PdgfbP31240 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PdgfbP31240 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PdgfbP31240 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PdgfbP31240 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PdgfbP31240 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PdgfbP31240 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
PdgfbP31240 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PdgfbP31240 Gm6415-201ENSMUST00000118488 348 ntBASIC15.64■□□□□ 0.09
PdgfbP31240 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.64■□□□□ 0.09
PdgfbP31240 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.64■□□□□ 0.09
PdgfbP31240 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.64■□□□□ 0.09
PdgfbP31240 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PdgfbP31240 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms