Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.59□□□□□ -0.07
Nedd8P29595 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.59□□□□□ -0.07
Nedd8P29595 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.59□□□□□ -0.07
Nedd8P29595 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Nedd8P29595 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.59□□□□□ -0.07
Nedd8P29595 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nedd8P29595 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nedd8P29595 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nedd8P29595 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nedd8P29595 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nedd8P29595 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.58□□□□□ -0.08
Nedd8P29595 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nedd8P29595 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nedd8P29595 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.58□□□□□ -0.08
Nedd8P29595 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.58□□□□□ -0.08
Nedd8P29595 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.58□□□□□ -0.08
Nedd8P29595 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Nedd8P29595 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.58□□□□□ -0.08
Nedd8P29595 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nedd8P29595 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nedd8P29595 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nedd8P29595 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nedd8P29595 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Nedd8P29595 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nedd8P29595 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.57□□□□□ -0.08
Nedd8P29595 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.57□□□□□ -0.08
Nedd8P29595 Gm9731-201ENSMUST00000209480 747 ntBASIC14.57□□□□□ -0.08
Nedd8P29595 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Efs-202ENSMUST00000227037 2540 ntBASIC14.57□□□□□ -0.08
Nedd8P29595 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nedd8P29595 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nedd8P29595 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nedd8P29595 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nedd8P29595 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Gm2559-201ENSMUST00000201323 363 ntBASIC14.56□□□□□ -0.08
Nedd8P29595 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.56□□□□□ -0.08
Nedd8P29595 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Nedd8P29595 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nedd8P29595 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nedd8P29595 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nedd8P29595 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms