Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.92■□□□□ 0.3
Irf8P23611 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Irf8P23611 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Irf8P23611 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.92■□□□□ 0.3
Irf8P23611 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Irf8P23611 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.92■□□□□ 0.3
Irf8P23611 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.92■□□□□ 0.3
Irf8P23611 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.92■□□□□ 0.3
Irf8P23611 Gm6089-201ENSMUST00000197666 938 ntBASIC16.92■□□□□ 0.3
Irf8P23611 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Irf8P23611 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.92■□□□□ 0.3
Irf8P23611 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Irf8P23611 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Irf8P23611 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Irf8P23611 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Irf8P23611 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Irf8P23611 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.91■□□□□ 0.3
Irf8P23611 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Irf8P23611 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Mir8098-201ENSMUST00000184011 137 ntBASIC16.91■□□□□ 0.3
Irf8P23611 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.91■□□□□ 0.3
Irf8P23611 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Irf8P23611 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Irf8P23611 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Irf8P23611 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Irf8P23611 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Irf8P23611 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Irf8P23611 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Irf8P23611 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.9■□□□□ 0.3
Irf8P23611 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.9■□□□□ 0.3
Irf8P23611 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.9■□□□□ 0.3
Irf8P23611 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Irf8P23611 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Irf8P23611 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Irf8P23611 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.89■□□□□ 0.3
Irf8P23611 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Irf8P23611 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.89■□□□□ 0.29
Irf8P23611 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Irf8P23611 Gm7862-201ENSMUST00000121461 292 ntBASIC16.89■□□□□ 0.29
Irf8P23611 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.89■□□□□ 0.29
Irf8P23611 Gm28659-201ENSMUST00000188013 759 ntBASIC16.89■□□□□ 0.29
Irf8P23611 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.89■□□□□ 0.29
Irf8P23611 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.89■□□□□ 0.29
Irf8P23611 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.89■□□□□ 0.29
Irf8P23611 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.89■□□□□ 0.29
Irf8P23611 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Irf8P23611 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Irf8P23611 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Irf8P23611 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
Irf8P23611 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Irf8P23611 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Irf8P23611 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Irf8P23611 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Irf8P23611 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Irf8P23611 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Irf8P23611 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Irf8P23611 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms