Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.14■□□□□ 0.33
Pde6bP23440 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6bP23440 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
Pde6bP23440 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.13■□□□□ 0.33
Pde6bP23440 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.13■□□□□ 0.33
Pde6bP23440 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.13■□□□□ 0.33
Pde6bP23440 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.13■□□□□ 0.33
Pde6bP23440 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.13■□□□□ 0.33
Pde6bP23440 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6bP23440 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.12■□□□□ 0.33
Pde6bP23440 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pde6bP23440 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.12■□□□□ 0.33
Pde6bP23440 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.12■□□□□ 0.33
Pde6bP23440 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.12■□□□□ 0.33
Pde6bP23440 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.12■□□□□ 0.33
Pde6bP23440 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.12■□□□□ 0.33
Pde6bP23440 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pde6bP23440 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.12■□□□□ 0.33
Pde6bP23440 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pde6bP23440 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6bP23440 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.11■□□□□ 0.33
Pde6bP23440 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.11■□□□□ 0.33
Pde6bP23440 Gm43575-201ENSMUST00000196420 516 ntBASIC17.11■□□□□ 0.33
Pde6bP23440 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pde6bP23440 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.11■□□□□ 0.33
Pde6bP23440 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6bP23440 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Pde6bP23440 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6bP23440 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pde6bP23440 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms