Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cbx3P23198 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cbx3P23198 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cbx3P23198 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cbx3P23198 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.35□□□□□ -0.11
Cbx3P23198 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.35□□□□□ -0.11
Cbx3P23198 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.35□□□□□ -0.11
Cbx3P23198 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.35□□□□□ -0.11
Cbx3P23198 Gm13148-201ENSMUST00000118892 745 ntBASIC14.35□□□□□ -0.11
Cbx3P23198 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cbx3P23198 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.35□□□□□ -0.11
Cbx3P23198 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cbx3P23198 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.35□□□□□ -0.11
Cbx3P23198 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cbx3P23198 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cbx3P23198 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cbx3P23198 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.34□□□□□ -0.11
Cbx3P23198 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.34□□□□□ -0.11
Cbx3P23198 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Gm11927-201ENSMUST00000118472 759 ntBASIC14.34□□□□□ -0.11
Cbx3P23198 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.34□□□□□ -0.11
Cbx3P23198 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cbx3P23198 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.34□□□□□ -0.11
Cbx3P23198 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cbx3P23198 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cbx3P23198 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Cbx3P23198 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Cbx3P23198 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.33□□□□□ -0.11
Cbx3P23198 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cbx3P23198 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cbx3P23198 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.33□□□□□ -0.12
Cbx3P23198 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.33□□□□□ -0.12
Cbx3P23198 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.33□□□□□ -0.12
Cbx3P23198 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.33□□□□□ -0.12
Cbx3P23198 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cbx3P23198 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cbx3P23198 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx3P23198 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cbx3P23198 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx3P23198 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx3P23198 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cbx3P23198 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.32□□□□□ -0.12
Cbx3P23198 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms