Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hoxc8P09025 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Hoxc8P09025 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.65■□□□□ 0.26
Hoxc8P09025 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.65■□□□□ 0.26
Hoxc8P09025 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hoxc8P09025 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hoxc8P09025 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.65■□□□□ 0.26
Hoxc8P09025 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxc8P09025 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.64■□□□□ 0.26
Hoxc8P09025 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Hoxc8P09025 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Gm14057-201ENSMUST00000120631 482 ntBASIC16.64■□□□□ 0.25
Hoxc8P09025 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Gm25948-201ENSMUST00000175334 112 ntBASIC16.64■□□□□ 0.25
Hoxc8P09025 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Hoxc8P09025 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxc8P09025 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Gm25287-201ENSMUST00000103846 110 ntBASIC16.63■□□□□ 0.25
Hoxc8P09025 Gm22918-201ENSMUST00000103855 110 ntBASIC16.63■□□□□ 0.25
Hoxc8P09025 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.63■□□□□ 0.25
Hoxc8P09025 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.63■□□□□ 0.25
Hoxc8P09025 Gm10154-201ENSMUST00000084445 354 ntBASIC16.63■□□□□ 0.25
Hoxc8P09025 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.63■□□□□ 0.25
Hoxc8P09025 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxc8P09025 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Mir449b-201ENSMUST00000104833 80 ntBASIC16.62■□□□□ 0.25
Hoxc8P09025 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.62■□□□□ 0.25
Hoxc8P09025 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Hoxc8P09025 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.62■□□□□ 0.25
Hoxc8P09025 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.62■□□□□ 0.25
Hoxc8P09025 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hoxc8P09025 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Hoxc8P09025 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxc8P09025 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc8P09025 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc8P09025 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hoxc8P09025 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc8P09025 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms