Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.89□□□□□ -0.03
ApoeP08226 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.89□□□□□ -0.03
ApoeP08226 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ApoeP08226 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ApoeP08226 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ApoeP08226 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.89□□□□□ -0.03
ApoeP08226 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ApoeP08226 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ApoeP08226 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Gm20760-201ENSMUST00000179197 648 ntBASIC14.88□□□□□ -0.03
ApoeP08226 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.88□□□□□ -0.03
ApoeP08226 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ApoeP08226 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ApoeP08226 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ApoeP08226 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ApoeP08226 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
ApoeP08226 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ApoeP08226 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ApoeP08226 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ApoeP08226 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Mir5122-201ENSMUST00000175004 89 ntBASIC14.87□□□□□ -0.03
ApoeP08226 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.87□□□□□ -0.03
ApoeP08226 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ApoeP08226 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.87□□□□□ -0.03
ApoeP08226 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ApoeP08226 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.87□□□□□ -0.03
ApoeP08226 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ApoeP08226 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ApoeP08226 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ApoeP08226 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ApoeP08226 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ApoeP08226 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ApoeP08226 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ApoeP08226 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ApoeP08226 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ApoeP08226 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.85□□□□□ -0.03
ApoeP08226 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.85□□□□□ -0.03
ApoeP08226 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ApoeP08226 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms