Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TnfP06804 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.64■□□□□ 0.25
TnfP06804 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.64■□□□□ 0.25
TnfP06804 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.64■□□□□ 0.25
TnfP06804 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.64■□□□□ 0.25
TnfP06804 Gm5867-201ENSMUST00000063197 592 ntBASIC16.64■□□□□ 0.25
TnfP06804 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.64■□□□□ 0.25
TnfP06804 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TnfP06804 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.64■□□□□ 0.25
TnfP06804 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.64■□□□□ 0.25
TnfP06804 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TnfP06804 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.63■□□□□ 0.25
TnfP06804 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.63■□□□□ 0.25
TnfP06804 Gm37935-201ENSMUST00000192012 982 ntBASIC16.63■□□□□ 0.25
TnfP06804 Gm9682-201ENSMUST00000197505 556 ntBASIC16.63■□□□□ 0.25
TnfP06804 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.63■□□□□ 0.25
TnfP06804 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.63■□□□□ 0.25
TnfP06804 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TnfP06804 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.63■□□□□ 0.25
TnfP06804 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
TnfP06804 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.63■□□□□ 0.25
TnfP06804 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TnfP06804 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TnfP06804 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TnfP06804 Gm14494-201ENSMUST00000118786 435 ntBASIC16.62■□□□□ 0.25
TnfP06804 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.62■□□□□ 0.25
TnfP06804 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Gm18489-201ENSMUST00000172565 551 ntBASIC16.62■□□□□ 0.25
TnfP06804 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.62■□□□□ 0.25
TnfP06804 Gm7787-201ENSMUST00000216858 688 ntBASIC16.62■□□□□ 0.25
TnfP06804 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.62■□□□□ 0.25
TnfP06804 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TnfP06804 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TnfP06804 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TnfP06804 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.62■□□□□ 0.25
TnfP06804 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TnfP06804 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TnfP06804 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TnfP06804 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TnfP06804 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TnfP06804 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TnfP06804 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TnfP06804 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.61■□□□□ 0.25
TnfP06804 Gm27300-201ENSMUST00000184085 97 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms