Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CopeO89079 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CopeO89079 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Gm44430-201ENSMUST00000203376 995 ntBASIC16.24■□□□□ 0.19
CopeO89079 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CopeO89079 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CopeO89079 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.24■□□□□ 0.19
CopeO89079 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CopeO89079 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.23■□□□□ 0.19
CopeO89079 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Gm13559-201ENSMUST00000120476 863 ntBASIC16.23■□□□□ 0.19
CopeO89079 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.23■□□□□ 0.19
CopeO89079 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.23■□□□□ 0.19
CopeO89079 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.23■□□□□ 0.19
CopeO89079 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.23■□□□□ 0.19
CopeO89079 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.23■□□□□ 0.19
CopeO89079 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CopeO89079 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CopeO89079 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CopeO89079 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 BC037039-201ENSMUST00000192003 2205 ntBASIC16.22■□□□□ 0.19
CopeO89079 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CopeO89079 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CopeO89079 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CopeO89079 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.22■□□□□ 0.19
CopeO89079 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.22■□□□□ 0.19
CopeO89079 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.22■□□□□ 0.19
CopeO89079 Gm27389-201ENSMUST00000183622 195 ntBASIC16.22■□□□□ 0.19
CopeO89079 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.22■□□□□ 0.19
CopeO89079 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.22■□□□□ 0.19
CopeO89079 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.22■□□□□ 0.19
CopeO89079 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CopeO89079 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CopeO89079 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CopeO89079 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.21■□□□□ 0.19
CopeO89079 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CopeO89079 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CopeO89079 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.21■□□□□ 0.19
CopeO89079 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.21■□□□□ 0.19
CopeO89079 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Gm27011-201ENSMUST00000182352 972 ntBASIC16.21■□□□□ 0.19
CopeO89079 Gm37722-201ENSMUST00000193757 208 ntBASIC16.21■□□□□ 0.19
CopeO89079 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.21■□□□□ 0.19
CopeO89079 Gm45058-201ENSMUST00000205810 766 ntBASIC16.21■□□□□ 0.19
CopeO89079 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.21■□□□□ 0.19
CopeO89079 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CopeO89079 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms