Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Gm10052-201ENSMUST00000168019 960 ntBASIC14.08□□□□□ -0.16
Hdac3O88895 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.08□□□□□ -0.16
Hdac3O88895 Gm7729-201ENSMUST00000050143 801 ntBASIC14.08□□□□□ -0.16
Hdac3O88895 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.08□□□□□ -0.16
Hdac3O88895 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hdac3O88895 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hdac3O88895 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Hdac3O88895 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.08□□□□□ -0.16
Hdac3O88895 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.07□□□□□ -0.16
Hdac3O88895 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.07□□□□□ -0.16
Hdac3O88895 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.07□□□□□ -0.16
Hdac3O88895 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hdac3O88895 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hdac3O88895 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.06□□□□□ -0.16
Hdac3O88895 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.06□□□□□ -0.16
Hdac3O88895 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.06□□□□□ -0.16
Hdac3O88895 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Gm11950-201ENSMUST00000121615 838 ntBASIC14.06□□□□□ -0.16
Hdac3O88895 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.06□□□□□ -0.16
Hdac3O88895 Gm29518-201ENSMUST00000190858 372 ntBASIC14.06□□□□□ -0.16
Hdac3O88895 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Hdac3O88895 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hdac3O88895 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdac3O88895 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hdac3O88895 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.05□□□□□ -0.16
Hdac3O88895 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdac3O88895 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms