Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sh2d1aO88890 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gm13836-201ENSMUST00000121159 501 ntBASIC11.15□□□□□ -0.62
Sh2d1aO88890 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.15□□□□□ -0.62
Sh2d1aO88890 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sh2d1aO88890 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Sh2d1aO88890 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Gm9013-201ENSMUST00000132939 882 ntBASIC11.14□□□□□ -0.63
Sh2d1aO88890 Gm6345-202ENSMUST00000180900 204 ntBASIC11.14□□□□□ -0.63
Sh2d1aO88890 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d1aO88890 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.13□□□□□ -0.63
Sh2d1aO88890 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.13□□□□□ -0.63
Sh2d1aO88890 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Gm23634-201ENSMUST00000175071 91 ntBASIC11.13□□□□□ -0.63
Sh2d1aO88890 Gm5587-201ENSMUST00000206270 674 ntBASIC11.13□□□□□ -0.63
Sh2d1aO88890 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d1aO88890 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d1aO88890 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms