Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Best1O88870 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Best1O88870 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Best1O88870 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.07■□□□□ 0
Best1O88870 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Gm27300-201ENSMUST00000184085 97 ntBASIC15.07■□□□□ 0
Best1O88870 Gm27335-201ENSMUST00000184758 97 ntBASIC15.07■□□□□ 0
Best1O88870 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.07■□□□□ 0
Best1O88870 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.07■□□□□ 0
Best1O88870 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.07■□□□□ 0
Best1O88870 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.07■□□□□ 0
Best1O88870 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.07■□□□□ 0
Best1O88870 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Best1O88870 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Best1O88870 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.07■□□□□ 0
Best1O88870 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Best1O88870 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Best1O88870 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Gm8318-201ENSMUST00000182954 872 ntBASIC15.06■□□□□ 0
Best1O88870 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Best1O88870 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.06■□□□□ 0
Best1O88870 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.06■□□□□ 0
Best1O88870 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.05■□□□□ 0
Best1O88870 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Best1O88870 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Best1O88870 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.05■□□□□ 0
Best1O88870 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.05■□□□□ 0
Best1O88870 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Best1O88870 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Best1O88870 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.05■□□□□ 0
Best1O88870 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Best1O88870 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Best1O88870 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.05■□□□□ 0
Best1O88870 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Best1O88870 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.05■□□□□ -0
Best1O88870 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Mir8117-201ENSMUST00000184773 107 ntBASIC15.05■□□□□ -0
Best1O88870 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.05■□□□□ -0
Best1O88870 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.05■□□□□ -0
Best1O88870 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.05■□□□□ -0
Best1O88870 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Best1O88870 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Best1O88870 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Best1O88870 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Best1O88870 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.04■□□□□ -0
Best1O88870 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.04■□□□□ -0
Best1O88870 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Gm14494-201ENSMUST00000118786 435 ntBASIC15.04■□□□□ -0
Best1O88870 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.04■□□□□ -0
Best1O88870 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.04■□□□□ -0
Best1O88870 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Best1O88870 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms