Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Cops6O88545 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.12■□□□□ 0.65
Cops6O88545 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Cops6O88545 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.12■□□□□ 0.65
Cops6O88545 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.11■□□□□ 0.65
Cops6O88545 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cops6O88545 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cops6O88545 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.11■□□□□ 0.65
Cops6O88545 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.11■□□□□ 0.65
Cops6O88545 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.11■□□□□ 0.65
Cops6O88545 Gm18246-201ENSMUST00000221023 728 ntBASIC19.11■□□□□ 0.65
Cops6O88545 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.11■□□□□ 0.65
Cops6O88545 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cops6O88545 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cops6O88545 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cops6O88545 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.11■□□□□ 0.65
Cops6O88545 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cops6O88545 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Cops6O88545 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Cops6O88545 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Cops6O88545 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Cops6O88545 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cops6O88545 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.1■□□□□ 0.65
Cops6O88545 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cops6O88545 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.09■□□□□ 0.65
Cops6O88545 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.09■□□□□ 0.65
Cops6O88545 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.09■□□□□ 0.65
Cops6O88545 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.09■□□□□ 0.65
Cops6O88545 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cops6O88545 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cops6O88545 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops6O88545 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Cops6O88545 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cops6O88545 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Cops6O88545 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops6O88545 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops6O88545 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops6O88545 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops6O88545 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cops6O88545 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.08■□□□□ 0.64
Cops6O88545 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cops6O88545 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cops6O88545 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.08■□□□□ 0.64
Cops6O88545 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cops6O88545 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.08■□□□□ 0.64
Cops6O88545 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.08■□□□□ 0.64
Cops6O88545 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cops6O88545 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms