Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnnt1O88346 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Tnnt1O88346 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnnt1O88346 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tnnt1O88346 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Tnnt1O88346 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnnt1O88346 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tnnt1O88346 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Gm45167-201ENSMUST00000208007 322 ntBASIC20.04■□□□□ 0.8
Tnnt1O88346 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.04■□□□□ 0.8
Tnnt1O88346 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC20.04■□□□□ 0.8
Tnnt1O88346 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnnt1O88346 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.03■□□□□ 0.8
Tnnt1O88346 Gm8344-201ENSMUST00000119813 856 ntBASIC20.03■□□□□ 0.8
Tnnt1O88346 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.03■□□□□ 0.8
Tnnt1O88346 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Tnnt1O88346 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.03■□□□□ 0.8
Tnnt1O88346 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tnnt1O88346 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tnnt1O88346 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.03■□□□□ 0.8
Tnnt1O88346 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tnnt1O88346 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnnt1O88346 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Gm4995-201ENSMUST00000117247 432 ntBASIC20.02■□□□□ 0.8
Tnnt1O88346 Gm14494-201ENSMUST00000118786 435 ntBASIC20.02■□□□□ 0.8
Tnnt1O88346 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tnnt1O88346 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnnt1O88346 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tnnt1O88346 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.02■□□□□ 0.79
Tnnt1O88346 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tnnt1O88346 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tnnt1O88346 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.01■□□□□ 0.79
Tnnt1O88346 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Tnnt1O88346 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnnt1O88346 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms