Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Gm10139O88245 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Gm10139O88245 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Gm1818-201ENSMUST00000169406 1184 ntBASIC9.57□□□□□ -0.88
Gm10139O88245 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC9.57□□□□□ -0.88
Gm10139O88245 Gm10252-201ENSMUST00000209541 832 ntBASIC9.57□□□□□ -0.88
Gm10139O88245 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Gm10139O88245 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Gm10139O88245 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Gm10139O88245 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Gm10139O88245 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Gm5421-201ENSMUST00000181698 2354 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Gm11839-201ENSMUST00000120647 1953 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Prkcz2-201ENSMUST00000206136 1756 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Gm13312-201ENSMUST00000119631 718 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 Gm11950-201ENSMUST00000121615 838 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC9.56□□□□□ -0.88
Gm10139O88245 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Gm10139O88245 Gm6345-202ENSMUST00000180900 204 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 Gm8349-201ENSMUST00000182720 1003 ntBASIC9.56□□□□□ -0.88
Gm10139O88245 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Gm10139O88245 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Gm10139O88245 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC9.56□□□□□ -0.88
Gm10139O88245 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Gm10139O88245 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
Gm10139O88245 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Gm10139O88245 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Gm10139O88245 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms