Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vamp4O70480 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.75■□□□□ 0.75
Vamp4O70480 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Vamp4O70480 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Vamp4O70480 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.75■□□□□ 0.75
Vamp4O70480 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.75■□□□□ 0.75
Vamp4O70480 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vamp4O70480 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.74■□□□□ 0.75
Vamp4O70480 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Vamp4O70480 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vamp4O70480 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.74■□□□□ 0.75
Vamp4O70480 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Gm44771-201ENSMUST00000206975 626 ntBASIC19.74■□□□□ 0.75
Vamp4O70480 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.74■□□□□ 0.75
Vamp4O70480 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Vamp4O70480 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Vamp4O70480 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vamp4O70480 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 Gm37153-201ENSMUST00000193637 231 ntBASIC19.73■□□□□ 0.75
Vamp4O70480 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vamp4O70480 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.73■□□□□ 0.75
Vamp4O70480 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vamp4O70480 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vamp4O70480 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.72■□□□□ 0.75
Vamp4O70480 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Vamp4O70480 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vamp4O70480 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Gm45167-201ENSMUST00000208007 322 ntBASIC19.72■□□□□ 0.75
Vamp4O70480 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Vamp4O70480 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.72■□□□□ 0.75
Vamp4O70480 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.72■□□□□ 0.75
Vamp4O70480 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vamp4O70480 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vamp4O70480 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vamp4O70480 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vamp4O70480 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.71■□□□□ 0.75
Vamp4O70480 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.71■□□□□ 0.75
Vamp4O70480 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms