Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trdmt1O55055 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trdmt1O55055 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
Trdmt1O55055 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.22■□□□□ 0.35
Trdmt1O55055 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Trdmt1O55055 Rpph1-201ENSMUST00000175096 319 ntBASIC17.22■□□□□ 0.35
Trdmt1O55055 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.22■□□□□ 0.35
Trdmt1O55055 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trdmt1O55055 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdmt1O55055 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trdmt1O55055 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trdmt1O55055 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trdmt1O55055 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.21■□□□□ 0.35
Trdmt1O55055 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Rprl2-201ENSMUST00000157150 290 ntBASIC17.21■□□□□ 0.35
Trdmt1O55055 AA543401-201ENSMUST00000164248 1269 ntBASIC17.21■□□□□ 0.35
Trdmt1O55055 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.21■□□□□ 0.35
Trdmt1O55055 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.21■□□□□ 0.35
Trdmt1O55055 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trdmt1O55055 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trdmt1O55055 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trdmt1O55055 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trdmt1O55055 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.2■□□□□ 0.34
Trdmt1O55055 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trdmt1O55055 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.2■□□□□ 0.34
Trdmt1O55055 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Gm9385-201ENSMUST00000117563 472 ntBASIC17.2■□□□□ 0.34
Trdmt1O55055 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Gm18889-201ENSMUST00000174284 929 ntBASIC17.2■□□□□ 0.34
Trdmt1O55055 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Gm43474-201ENSMUST00000196415 774 ntBASIC17.2■□□□□ 0.34
Trdmt1O55055 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Trdmt1O55055 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.2■□□□□ 0.34
Trdmt1O55055 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trdmt1O55055 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdmt1O55055 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm16198-201ENSMUST00000118766 670 ntBASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdmt1O55055 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.19■□□□□ 0.34
Trdmt1O55055 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms