Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.29■□□□□ 0.2
Cldn5O54942 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn5O54942 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn5O54942 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn5O54942 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.28■□□□□ 0.2
Cldn5O54942 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.28■□□□□ 0.2
Cldn5O54942 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.28■□□□□ 0.2
Cldn5O54942 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn5O54942 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cldn5O54942 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm11764-201ENSMUST00000120221 623 ntBASIC16.27■□□□□ 0.2
Cldn5O54942 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn5O54942 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.27■□□□□ 0.2
Cldn5O54942 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.27■□□□□ 0.2
Cldn5O54942 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn5O54942 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Cldn5O54942 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn5O54942 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn5O54942 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.27■□□□□ 0.19
Cldn5O54942 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cldn5O54942 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.26■□□□□ 0.19
Cldn5O54942 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.26■□□□□ 0.19
Cldn5O54942 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.26■□□□□ 0.19
Cldn5O54942 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.26■□□□□ 0.19
Cldn5O54942 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.26■□□□□ 0.19
Cldn5O54942 Gm45167-201ENSMUST00000208007 322 ntBASIC16.26■□□□□ 0.19
Cldn5O54942 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.26■□□□□ 0.19
Cldn5O54942 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.26■□□□□ 0.19
Cldn5O54942 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn5O54942 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.25■□□□□ 0.19
Cldn5O54942 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.25■□□□□ 0.19
Cldn5O54942 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.25■□□□□ 0.19
Cldn5O54942 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.25■□□□□ 0.19
Cldn5O54942 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.25■□□□□ 0.19
Cldn5O54942 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.25■□□□□ 0.19
Cldn5O54942 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn5O54942 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn5O54942 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms