Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.06■□□□□ 0.32
Clk2O35491 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clk2O35491 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.05■□□□□ 0.32
Clk2O35491 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.05■□□□□ 0.32
Clk2O35491 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Clk2O35491 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.05■□□□□ 0.32
Clk2O35491 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.05■□□□□ 0.32
Clk2O35491 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.05■□□□□ 0.32
Clk2O35491 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clk2O35491 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.04■□□□□ 0.32
Clk2O35491 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.04■□□□□ 0.32
Clk2O35491 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.04■□□□□ 0.32
Clk2O35491 Gm37935-201ENSMUST00000192012 982 ntBASIC17.04■□□□□ 0.32
Clk2O35491 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.04■□□□□ 0.32
Clk2O35491 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clk2O35491 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Clk2O35491 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clk2O35491 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clk2O35491 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clk2O35491 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Clk2O35491 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.03■□□□□ 0.32
Clk2O35491 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Clk2O35491 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Clk2O35491 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Gm11594-201ENSMUST00000122313 162 ntBASIC17.03■□□□□ 0.32
Clk2O35491 Gm7787-201ENSMUST00000216858 688 ntBASIC17.03■□□□□ 0.32
Clk2O35491 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.03■□□□□ 0.32
Clk2O35491 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Clk2O35491 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.03■□□□□ 0.32
Clk2O35491 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clk2O35491 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.03■□□□□ 0.32
Clk2O35491 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clk2O35491 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Clk2O35491 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clk2O35491 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.02■□□□□ 0.32
Clk2O35491 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clk2O35491 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.02■□□□□ 0.32
Clk2O35491 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.02■□□□□ 0.32
Clk2O35491 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.02■□□□□ 0.32
Clk2O35491 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.02■□□□□ 0.32
Clk2O35491 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms