Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ebf3O08791 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.3■□□□□ 0.2
Ebf3O08791 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ebf3O08791 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.29■□□□□ 0.2
Ebf3O08791 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.29■□□□□ 0.2
Ebf3O08791 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ebf3O08791 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Gm4995-201ENSMUST00000117247 432 ntBASIC16.29■□□□□ 0.2
Ebf3O08791 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.29■□□□□ 0.2
Ebf3O08791 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.29■□□□□ 0.2
Ebf3O08791 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.29■□□□□ 0.2
Ebf3O08791 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Ebf3O08791 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ebf3O08791 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.28■□□□□ 0.2
Ebf3O08791 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ebf3O08791 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ebf3O08791 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ebf3O08791 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ebf3O08791 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.28■□□□□ 0.2
Ebf3O08791 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.28■□□□□ 0.2
Ebf3O08791 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ebf3O08791 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.28■□□□□ 0.2
Ebf3O08791 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Ebf3O08791 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ebf3O08791 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ebf3O08791 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ebf3O08791 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Mir6404-201ENSMUST00000183699 94 ntBASIC16.27■□□□□ 0.2
Ebf3O08791 Gm2756-201ENSMUST00000195851 400 ntBASIC16.27■□□□□ 0.2
Ebf3O08791 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.27■□□□□ 0.2
Ebf3O08791 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.27■□□□□ 0.2
Ebf3O08791 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ebf3O08791 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ebf3O08791 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ebf3O08791 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ebf3O08791 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ebf3O08791 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ebf3O08791 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.27■□□□□ 0.19
Ebf3O08791 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ebf3O08791 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Ebf3O08791 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf3O08791 Gm14822-201ENSMUST00000122247 291 ntBASIC16.26■□□□□ 0.19
Ebf3O08791 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.26■□□□□ 0.19
Ebf3O08791 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebf3O08791 Gm24513-201ENSMUST00000174964 138 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms