Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.09■□□□□ 0.01
Polr2jO08740 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Polr2jO08740 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.09■□□□□ 0.01
Polr2jO08740 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.09■□□□□ 0.01
Polr2jO08740 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Polr2jO08740 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.08■□□□□ 0
Polr2jO08740 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Gm11355-201ENSMUST00000121120 306 ntBASIC15.08■□□□□ 0
Polr2jO08740 Mir6404-201ENSMUST00000183699 94 ntBASIC15.08■□□□□ 0
Polr2jO08740 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.08■□□□□ 0
Polr2jO08740 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.08■□□□□ 0
Polr2jO08740 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Polr2jO08740 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.08■□□□□ 0
Polr2jO08740 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Polr2jO08740 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Polr2jO08740 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.07■□□□□ 0
Polr2jO08740 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Polr2jO08740 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Polr2jO08740 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Polr2jO08740 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Gm43799-201ENSMUST00000201845 579 ntBASIC15.07■□□□□ 0
Polr2jO08740 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Polr2jO08740 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.07■□□□□ 0
Polr2jO08740 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.07■□□□□ 0
Polr2jO08740 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.07■□□□□ 0
Polr2jO08740 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Polr2jO08740 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.07■□□□□ 0
Polr2jO08740 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.06■□□□□ 0
Polr2jO08740 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.06■□□□□ 0
Polr2jO08740 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Polr2jO08740 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Polr2jO08740 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Polr2jO08740 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.06■□□□□ 0
Polr2jO08740 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Polr2jO08740 Gm6257-201ENSMUST00000163864 910 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms