Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Gm11236J3QMS7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Gm11236J3QMS7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Auts2-212ENSMUST00000178555 309 ntBASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Gm2272-201ENSMUST00000194903 582 ntBASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.34■□□□□ 0.21
Gm11236J3QMS7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Gm11236J3QMS7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm11236J3QMS7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm11236J3QMS7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Gm11236J3QMS7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.33■□□□□ 0.2
Gm11236J3QMS7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gm11236J3QMS7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.32■□□□□ 0.2
Gm11236J3QMS7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Gm44872-201ENSMUST00000207864 420 ntBASIC16.32■□□□□ 0.2
Gm11236J3QMS7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms